CESSHIV-1 database

General information on HIV-1 isolate

# 322

Accession number	AY463224
Name	C.ZA.1162MB
Subtype	C
Country	South Africa
Sampling year	2000
Patient	1162M

AY463224 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccctt tgtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacccgaa agtgaaagta agaccagagg aggtctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy