CESSHIV-1 database

General information on HIV-1 isolate

# 417

Accession number	AY727522
Name	04BR013
Subtype	C
Country	Brazil
Sampling year	2004

AY727522 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtagc tagagatccc tcagatacct tttgtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta gaaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy