CESSHIV-1 database

General information on HIV-1 isolate

# 425

Accession number	AY838567
Name	1069MB
Subtype	C
Country	South Africa
Sampling year	2000
Patient	1069M

AY838567 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt tgtggtagtg tggaaaatct ccagcagtgg cgcccgaaca gggacttgaa agcgaaagta ggaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy