CESSHIV-1 database

General information on HIV-1 isolate

# 561

Accession number	DQ164124
Name	03ZASK086B1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	086B1

DQ164124 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctagtaac tagagatccc tcagaccaat tttagtagtg tagaaaatcc ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta agaccagaga agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy