CESSHIV-1 database

General information on HIV-1 isolate

# 1227

Accession number	DQ275649
Name	03ZAPS073MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	073MB

DQ275649 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt tgtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta ggaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy