CESSHIV-1 database

General information on HIV-1 isolate

# 644

Accession number	DQ369978
Name	03ZAPS021MB1
Subtype	C
Country	South Africa
Sampling year	2003
Patient	PS-021M

DQ369978 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtgg ctctggtaac tagagatccc tcagaccctt tttggttgtg tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta agaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy