CESSHIV-1 database

General information on HIV-1 isolate

# 711

Accession number	DQ396389
Name	03ZAPS067MB2
Subtype	C
Country	South Africa
Sampling year	2003
Patient	067MB

DQ396389 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtgg ctctggtaac tagagatccc tcagaccaat agtggtagtg tggaaaatct ctagcagtgg cgcccgaaca gggacccgaa agcgaaagta cgaccagagt agaactctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy