CESSHIV-1 database

General information on HIV-1 isolate

# 953

Accession number	EF091932
Name	110PA
Subtype	CRF31_BC
Country	Brazil
Sampling year	2002
Patient	PA110

EF091932 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacacct ttwgtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggactcgaa agcgaaagta agaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy