CESSHIV-1 database

General information on HIV-1 isolate

# 2790

Accession number	EU170148
Name	luBF_04_03
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2003

EU170148 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtccgtg tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta gaaccagagg agctctctcg acgcaggac

Isolates with identical sequences of region:

EU170154(#2796)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy