CESSHIV-1 database

General information on HIV-1 isolate

# 1854

Accession number	FJ771009
Name	06BR579
Subtype	F1
Country	Brazil
Sampling year	2006

FJ771009 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacc-ttt tagtcagtgt ggaaaatctc tagcagtggc gcccgaacag ggacgcgaaa gcgaaagtag aaccagagaa gatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy