CESSHIV-1 database

General information on HIV-1 isolate

# 3201

Accession number	GQ290462
Name	D88_845
Subtype	F1
Country	Russia
Sampling year	2008
Patient	D88_845

GQ290462 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt ttagtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacgcgaa agcgaaagta gaaccagagg agatctctcg acgcaggac

Isolates with identical sequences of region:

EU735538(#1052) GU595154(#3323)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy