CESSHIV-1 database

General information on HIV-1 isolate

# 5023

Accession number	PBS-04RU1077
Name	04RU1077-PBS-(EU938095/FJ503054)
Subtype
Country
Submitted to NCBI

PBS-04RU1077 isolate has foldings of [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtatga ctctggtaac tagagatccc tcagaccact ctaggcggtg ta-aaaatctc tagcagtggc gcccgaacag ggactcgaaa gcgaaagtt---c cagagaagtt ctctcgacgc aggac

Isolates with identical sequences of region:

PBS-02RU872(#5013) PBS-96RU191(#5006)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy