CESSHIV-1 database

General information on HIV-1 isolate

# 5007

Accession number	PBS-97RU260
Name	97RU260-PBS-(EU938110/FJ437014)
Subtype
Country
Submitted to NCBI

PBS-97RU260 isolate has foldings of [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtatga ctctggtaac tagagatccc tcagaccact ctaggcggtg ta-aaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtt---c cagagaagtt ctctcgacgc aggac

Isolates with identical sequences of region:

PBS-03RU1098(#5024) PBS-98RU365(#5003) PBS-99RU532(#5020) PBS-99RU553(#5019)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy