CESSHIV-1 database

General information on HIV-1 isolate

# 5008

Accession number	PBS-98RU340
Name	98RU340-PBS-(EU938113/FJ437015)
Subtype
Country
Submitted to NCBI

PBS-98RU340 isolate has foldings of [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtatga ctctggtaac tagagatccc tcagaccact ctaggcagtg ta-aaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagtt---c cagagaagtt ctctcgacgc aggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy