CESSHIV-1 database

General information on HIV-1 isolate

# 3308

Accession number	AJ237579
Name	97NOGIL4
Subtype	A1DHK
Country	Norway
Sampling year	1997
Patient	NOGIL4

AJ237579 isolate has foldings of [USE domain, TAR, polyA] [USE region] [USE, TAR, polyA] .

The region encompassing USE region

The primary sequence:

gttggggagt ggctaaccct cagatgctgc atataagcag ctgcttttcg cctgtactgg gtctctctgg ttggaccaga tctgagcctg ggagctctct ggctagctag ggaacccact gcttaagcct caataaagct tgccttgagt gctttaagta gtgt

Isolates with identical sequences of region:

AJ237566(#1530)

CESSHIV-1 DATABASE

General information on HIV-1 isolate

The region encompassing USE region

The primary sequence:

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy