CESSHIV-1 database

General information on HIV-1 isolate

# 1736

Accession number	EF370267
Name	97KYR2_2650
Subtype	B
Country	South Korea
Sampling year	1997
Patient	KYR

EF370267 isolate has foldings of [DIS region] [Core poly(A) site] [123nt 3' terminus] [USE, TAR, polyA] .

The region encompassing USE, TAR, polyA

The primary sequence:

agcagctgct ctttgcctgt actgggtctc tctggttaga ccagatctga gcctgggagc tctctggcta gctagggaac ccactgctta agcctcaata aagcttgcct tgagtgcttt aagtagtgt

Isolates with identical sequences of region:

DQ295196(#) EF370261(#2244) EF370262(#2246) EF370265(#2247) EF370268(#1737) EF370281(#1742) EU047674(#2273)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy