CESSHIV-1 database

General information on HIV-1 isolate

# 62

Accession number	AF004885
Name	Q23-17
Subtype	A1
Country	Kenya
Sampling year	1994
Patient	Q23

AF004885 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aatt-ttttga ctagcggagg ctagaaggag aga

Isolates with identical sequences of region:

EU697904(#1113)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy