CESSHIV-1 database

General information on HIV-1 isolate

# 1113

Accession number	EU697904
Name	J11223
Subtype	CRF43_02G
Country	Saudi Arabia
Sampling year	2003
Patient	J11223

EU697904 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aatt-ttttga ctagcggagg ctagaaggag aga

Isolates with identical sequences of region:

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy