CESSHIV-1 database

General information on HIV-1 isolate

# 146

Accession number	AF110980
Name	C-96BW17B03
Subtype	C
Country	Botswana
Sampling year	1996
Patient	BW17

AF110980 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcag gaggcgagag -cggcggctgg tgagtacgcc aaattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AF443102(#200) AY074891(#161)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy