CESSHIV-1 database

General information on HIV-1 isolate

# 1988

Accession number	AY118155
Name	97TH87
Subtype	CRF01_AE
Country	Thailand
Sampling year	1997
Patient	97TH87

AY118155 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggctactgg tgagtacgcc aaa--ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy