CESSHIV-1 database

General information on HIV-1 isolate

# 246

Accession number	AY173953
Name	US2
Subtype	B
Country	USA
Sampling year	1990
Patient	US2

AY173953 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaaatttt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AB485638(#2741) AB485639(#2742) AB485640(#2743) HM586210(#3336) HM586211(#3337) HM586212(#3338)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy