CESSHIV-1 database

General information on HIV-1 isolate

# 452

Accession number	AY586540
Name	CU76
Subtype	CRF18_cpx
Country	Cuba
Sampling year	1999
Patient	CU76

AY586540 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacagcaa gaggcgagag -cggcgactgg tgagtacgcc aaaatttttg actagcggag gctagaagga gaga

Isolates with identical sequences of region:

AF084936(#59) FJ389363(#1904)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy