CESSHIV-1 database

General information on HIV-1 isolate

# 1191

Accession number	EU786678
Name	ES X2149 (B)
Subtype	B
Country	Spain
Sampling year	2007
Patient	2149

EU786678 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaatttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AY857022(#1620) AY857185(#1446) EF178303(#1445) EF178405(#1697)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy