CESSHIV-1 database

General information on HIV-1 isolate

# 1103

Accession number	A07108
Name	ELI
Subtype	D
Country
Submitted to NCBI	1988
Patient	ELI
Comments	Patent

A07108 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacccct ttagtcagag tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta gaaccagagg agctctctcg acgcaggac

Isolates with identical sequences of region:

A14116(#1106) K03454(#162)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy