CESSHIV-1 database

General information on HIV-1 isolate

# 162

Accession number	K03454
Name	ELI
Subtype	D
Country	DRC
Sampling year	1983
Patient	ELI

K03454 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacccct ttagtcagag tggaaaatct ctagcagtgg cgcccgaaca gggacctgaa agcgaaagta gaaccagagg agctctctcg acgcaggac

Isolates with identical sequences of region:

A07108(#1103) A14116(#1106)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy