CESSHIV-1 database

General information on HIV-1 isolate

# 418

Accession number	AY727523
Name	04BR021
Subtype	C
Country	Brazil
Sampling year	2004

AY727523 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagacgcct ttcgtcagtg tggaaaatct ctagcagtgg cgcccgaaca gggacttgaa agcgaaagta agaccagagg agatctctcg acgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy