CESSHIV-1 database

General information on HIV-1 isolate

# 3335

Accession number	HM026455
Name	06BR_FPS561
Subtype	BF1
Country	Brazil
Sampling year	2006
Patient	FPS561

HM026455 isolate has foldings of [DIS region] [PBS region] .

The region encompassing PBS domain

The primary sequence:

tgttgtgtga ctctggtaac tagagatccc tcagaccatt t-agtcagtgt ggaaaatctc tagcagtggc gcccgaacag ggacttgaaa gcgaaagcag aaccagagga gatctctcga cgcaggac

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy