CESSHIV-1 database

General information on HIV-1 isolate

# 156

Accession number	AF408631
Name	A050
Subtype	BF
Country	Argentina
Sampling year	1997
Patient	AF050

AF408631 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgaccg gtgagtacgc caaaattttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

DQ837381(#753) EF363127(#969) EU047605(#1559) EU047608(#1811)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy