CESSHIV-1 database

General information on HIV-1 isolate

# 1851

Accession number	AY118160
Name	94BR77
Subtype	F1
Country	Brazil
Sampling year	1994
Patient	94BR77

AY118160 isolate has foldings of [DIS region] [PBS region] [123nt 3' terminus] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc aaa--ttttgac tagcggaggc tagaaggaga ga

Isolates with identical sequences of region:

FJ771007(#2761) FJ771008(#1853)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy