CESSHIV-1 database

General information on HIV-1 isolate

# 2796

Accession number	EU170154
Name	luBF_02_03
Subtype	CRF42_BF
Country	Luxembourg
Sampling year	2003

EU170154 isolate has foldings of [DIS region] [PBS region] [Core poly(A) site] [123nt 3' terminus] .

The region encompassing 123 nt 3' terminus

The primary sequence:

cactgcttaa gcctcaataa agcttgcctt gagtgcttca agtagtgtgt gcccgtctgt tgtgtgactc tggtaactag agatccctca gaccatttta gtccgtgtgg aaaatctcta gca

Isolates with identical sequences of region:

EU170138(#2972) EU170140(#2974) EU170146(#2788) EU170148(#2790) EU170149(#2791) EU170151(#2793) U81467(#2572)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy