CESSHIV-1 database

General information on HIV-1 isolate

# 3498

Accession number	AB371865
Name	JRC55
Subtype	B
Country	Japan
Submitted to NCBI	2007

AB371865 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc ctaaa---ttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy