CESSHIV-1 database

General information on HIV-1 isolate

# 49

Accession number	AF005494
Name	93BR020_1
Subtype	F1
Country	Brazil
Sampling year	1993
Patient	BR020

AF005494 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc aaa--atttgac tagcagaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy