CESSHIV-1 database

General information on HIV-1 isolate

# 44

Accession number	AF042102
Name	MBCC18B
Subtype	B
Country	Australia
Sampling year	1993
Patient	C18

AF042102 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcggcgactg gtgagtacgc cgaaaatttt gactagcgga ggctagaagg agaga

Isolates with identical sequences of region:

AF042106(#48) EF370332(#1775) U37270(#2500)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy