CESSHIV-1 database

General information on HIV-1 isolate

# 47

Accession number	AF042105
Name	MBCD36
Subtype	B
Country	Australia
Sampling year	1996
Patient	D36

AF042105 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacagcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatttt gactagcgga ggctagaagg agaaa

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy