CESSHIV-1 database

General information on HIV-1 isolate

# 1392

Accession number	AF082394
Name	SE9280_7887
Subtype	J
Country	Sweden (DRC)
Sampling year	1993
Patient	SE7887

AF082394 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgaggg gcggcgactg gtgagtacgc caaaaatatt tttgactagc ggaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy