CESSHIV-1 database

General information on HIV-1 isolate

# 136

Accession number	AF110970
Name	C-96BW11.06
Subtype	C
Country	Botswana
Sampling year	1996
Patient	96BW11

AF110970 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag g-ggcggctgg tgagtacgcc aaatttgatt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy