CESSHIV-1 database

General information on HIV-1 isolate

# 77

Accession number	AF179368
Name	GR17
Subtype	CRF11_cpx
Country	Greece (DRC)
Submitted to NCBI	1999
Patient	GR17

AF179368 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacgcagcaa gaggcgagag -cggcggctgg tgagtacgcc aaaaaatttt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy