CESSHIV-1 database

General information on HIV-1 isolate

# 79

Accession number	AF192135
Name	98BW21.17
Subtype	A1GJ
Country	Botswana
Sampling year	1998
Patient	BW2117

AF192135 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcgactgg tgagtacgcc gaaaaatttg ttttgactag cggaggctag aaggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy