CESSHIV-1 database

General information on HIV-1 isolate

# 1402

Accession number	AF286242
Name	94CY017
Subtype	A2
Country	Cyprus
Sampling year	1994
Patient	CY017

AF286242 isolate has foldings of [DIS region] [PBS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaggtg cacacggcaa gaggcgaggg gcggcgactg gtgagtacgc ctaatatttt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy