CESSHIV-1 database

General information on HIV-1 isolate

# 1528

Accession number	AF442569
Name	TZBFL0011
Subtype	A1D
Country	Tanzania
Sampling year	1996
Patient	11

AF442569 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg gcagcgaacg gtgagtacgc tgaaattttt gactagcgga ggctaggagg agaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy