CESSHIV-1 database

General information on HIV-1 isolate

# 1529

Accession number	AF442570
Name	TZBFL0088
Subtype	A1D
Country	Tanzania
Sampling year	1996
Patient	88

AF442570 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcgcagcaa gaggcgaggg gcagcgaacg gtgagtacgc tat---ttttgac tagcggaggc tagaaggaga ga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy