CESSHIV-1 database

General information on HIV-1 isolate

# 173

Accession number	AF443075
Name	96BWMO3.2
Subtype	C
Country	Botswana
Sampling year	1996
Patient	MO32

AF443075 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagcg cgcacggcaa gaggcgaggg g-ggcgactgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy