CESSHIV-1 database

General information on HIV-1 isolate

# 178

Accession number	AF443080
Name	98BWMO18.d5
Subtype	C
Country	Botswana
Sampling year	1998
Patient	MO18D5

AF443080 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaaagt gcactcggca agaggcgaga ggcggcggct ggtgagtacg ccaaatttta tttgactagc ggaggctaga aggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy