CESSHIV-1 database

General information on HIV-1 isolate

# 180

Accession number	AF443082
Name	98BWMO37.d5
Subtype	C
Country	Botswana
Sampling year	1998
Patient	MO37D5

AF443082 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag g-ggcgactgg tgagtacgcc aaaatttatt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy