CESSHIV-1 database

General information on HIV-1 isolate

# 195

Accession number	AF443097
Name	00BW1795.6
Subtype	C
Country	Botswana
Sampling year	2000
Patient	17956

AF443097 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cacacggcaa gaggcgagag -cggcggctgg tgagtacgcc aaattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AB254149(#812) GQ999983(#3373)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy