CESSHIV-1 database

General information on HIV-1 isolate

# 201

Accession number	AF443103
Name	00BW2063.6
Subtype	C
Country	Botswana
Sampling year	2000
Patient	20636

AF443103 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag a-ggcgactgg tgagtacgcc aatttttatt tgactagcgg aggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy