CESSHIV-1 database

General information on HIV-1 isolate

# 204

Accession number	AF443106
Name	00BW2128.3
Subtype	C
Country	Botswana
Sampling year	2000
Patient	21283

AF443106 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcgactgg tgagtacgcc gaaattttat ttgactagcg gaggctagaa ggagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy