CESSHIV-1 database

General information on HIV-1 isolate

# 161

Accession number	AY074891
Name	00BWM035.1
Subtype	CD
Country	Botswana
Sampling year	2000

AY074891 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcag gaggcgagag -cggcggctgg tgagtacgcc aaattttatt tgactagcgg aggctagaag gagaga

Isolates with identical sequences of region:

AF110980(#146) AF443102(#200)

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy