CESSHIV-1 database

General information on HIV-1 isolate

# 253

Accession number	AY158535
Name	98ZA528 clone 6
Subtype	C
Country	South Africa
Sampling year	1998
Patient	528

AY158535 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

ggactcggct tgctgaagtg cactcggcaa gaggcgagag -cggcggctgg tgagtacgcc aatttttatt tgactagcgg tggctagaag gagaga

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy