CESSHIV-1 database

General information on HIV-1 isolate

# 304

Accession number	AY169811
Name	98CMABB197
Subtype	Group O
Country	Cameroon
Sampling year	1998
Patient	197

AY169811 isolate has foldings of [DIS region] .

The region encompassing DIS SD and Psi hairpins

The primary sequence:

gggctcggct tagcggagtg cacccgctaa gaggcgag-----ag gaactcacag agggtgagta attttg-ctgg cggtggccag acctagagga agggcgaagt ctctagggga ggaa

The optimal secondary structure:

The suboptimal structures within ΔΔG ≤ 4 kcal/mole of the minimum free energy